Update protobuf-java to 3.25.5 (#24333)

### Description
Update protobuf-java to 3.25.5



### Motivation and Context
To fix the [CG
issue](https://aiinfra.visualstudio.com/Lotus/_componentGovernance/218239/alert/12112143?typeId=29309793&pipelinesTrackingFilter=0).

Change file links

- [x] java_linux_final_test.sh -> java-cuda-packaging-stage.yml
(Jar_Packaging_GPU stage from Zip-Nuget)
- [ ] final-jar-testing.yml (Final_Jar_Testing_$ stages)

Author: jchen351

cgmanifests/cgmanifest.json

@@ -18,7 +18,7 @@
         "maven": {
           "GroupId": "com.google.protobuf",
           "ArtifactId": "protobuf-java",
-          "Version": "3.21.7"
+          "Version": "3.25.5"
         },
         "DevelopmentDependency": true
       }

java/build-android.gradle

@@ -147,7 +147,7 @@ artifacts {
 dependencies {
 	testImplementation 'org.junit.jupiter:junit-jupiter-api:5.7.0'
 	testRuntimeOnly 'org.junit.jupiter:junit-jupiter-engine:5.7.0'
-	testImplementation 'com.google.protobuf:protobuf-java:3.21.7'
+	testImplementation 'com.google.protobuf:protobuf-java:3.25.5'
 }
 
 publishing {

java/build.gradle

@@ -179,7 +179,7 @@ if (cmakeBuildDir != null) {
 dependencies {
 	testImplementation 'org.junit.jupiter:junit-jupiter-api:5.9.2'
 	testRuntimeOnly 'org.junit.jupiter:junit-jupiter-engine:5.9.2'
-	testImplementation 'com.google.protobuf:protobuf-java:3.21.7'
+	testImplementation 'com.google.protobuf:protobuf-java:3.25.5'
 }
 
 processTestResources {

tools/ci_build/github/azure-pipelines/stages/download-java-tools-stage.yml

@@ -15,7 +15,7 @@ stages:
           mkdir -p java-tools
           pushd java-tools
           wget --tries=3 https://oss.sonatype.org/service/local/repositories/releases/content/org/junit/platform/junit-platform-console-standalone/1.6.2/junit-platform-console-standalone-1.6.2.jar -P ./
-          wget --tries=3 https://oss.sonatype.org/service/local/repositories/releases/content/com/google/protobuf/protobuf-java/3.21.7/protobuf-java-3.21.7.jar -P ./
+          wget --tries=3 https://oss.sonatype.org/service/local/repositories/releases/content/com/google/protobuf/protobuf-java/3.25.5/protobuf-java-3.25.5.jar -P ./
           popd
         workingDirectory: '$(Agent.TempDirectory)'
 

tools/ci_build/github/azure-pipelines/stages/java-cuda-packaging-stage.yml

@@ -122,7 +122,7 @@ stages:
           pushd test
           jar xf $(Build.BinariesDirectory)\final-jar\testing.jar
           popd
-          java -DUSE_CUDA=1 -jar junit-platform-console-standalone-1.6.2.jar -cp .;.\test;protobuf-java-3.21.7.jar;onnxruntime_gpu-$(OnnxRuntimeVersion).jar --scan-class-path --fail-if-no-tests --disable-banner
+          java -DUSE_CUDA=1 -jar junit-platform-console-standalone-1.6.2.jar -cp .;.\test;protobuf-java-3.25.5.jar;onnxruntime_gpu-$(OnnxRuntimeVersion).jar --scan-class-path --fail-if-no-tests --disable-banner
         workingDirectory: '$(Build.BinariesDirectory)\final-jar'
   - job: Final_Jar_Testing_Linux_GPU
     dependsOn:

tools/ci_build/github/azure-pipelines/templates/final-jar-testing.yml

@@ -69,7 +69,7 @@ stages:
             pushd test
             jar xf $(Build.BinariesDirectory)\final-jar\testing.jar
             popd
-            java -jar junit-platform-console-standalone-1.6.2.jar -cp .;.\test;protobuf-java-3.21.7.jar;onnxruntime-$(OnnxRuntimeVersion).jar --scan-class-path --fail-if-no-tests --disable-banner
+            java -jar junit-platform-console-standalone-1.6.2.jar -cp .;.\test;protobuf-java-3.25.5.jar;onnxruntime-$(OnnxRuntimeVersion).jar --scan-class-path --fail-if-no-tests --disable-banner
           workingDirectory: '$(Build.BinariesDirectory)\final-jar'
     - ${{ else }}:
       - task: Bash@3
@@ -83,8 +83,8 @@ stages:
             pushd test
             jar xf '$(Build.BinariesDirectory)/final-jar/testing.jar'
             popd
-            # if you want to run the tests in the power shell, you need to replace ':' to ';', that is,  "-cp .;.\test;protobuf-java-3.21.7.jar;onnxruntime-$(OnnxRuntimeVersion).jar"
-            java -jar ./junit-platform-console-standalone-1.6.2.jar -cp .:./test:./protobuf-java-3.21.7.jar:./onnxruntime-$(OnnxRuntimeVersion).jar --scan-class-path --fail-if-no-tests --disable-banner
+            # if you want to run the tests in the power shell, you need to replace ':' to ';', that is,  "-cp .;.\test;protobuf-java-3.25.5.jar;onnxruntime-$(OnnxRuntimeVersion).jar"
+            java -jar ./junit-platform-console-standalone-1.6.2.jar -cp .:./test:./protobuf-java-3.25.5.jar:./onnxruntime-$(OnnxRuntimeVersion).jar --scan-class-path --fail-if-no-tests --disable-banner
           workingDirectory: '$(Build.BinariesDirectory)/final-jar'
         env:
           ${{ if eq(parameters.OS, 'MacOS') }}:

tools/ci_build/github/linux/java_linux_final_test.sh

@@ -32,8 +32,8 @@ jar xf "$BINARY_DIR/final-jar/testing.jar"
 popd
 
 curl -O -sSL https://oss.sonatype.org/service/local/repositories/releases/content/org/junit/platform/junit-platform-console-standalone/1.6.2/junit-platform-console-standalone-1.6.2.jar
-curl -O -sSL https://oss.sonatype.org/service/local/repositories/releases/content/com/google/protobuf/protobuf-java/3.21.7/protobuf-java-3.21.7.jar
-java -DUSE_CUDA=1 -jar ./junit-platform-console-standalone-1.6.2.jar -cp .:./test:./protobuf-java-3.21.7.jar:./onnxruntime_gpu-"${VERSION_NUMBER}".jar --scan-class-path --fail-if-no-tests --disable-banner
+curl -O -sSL https://oss.sonatype.org/service/local/repositories/releases/content/com/google/protobuf/protobuf-java/3.25.5/protobuf-java-3.25.5.jar
+java -DUSE_CUDA=1 -jar ./junit-platform-console-standalone-1.6.2.jar -cp .:./test:./protobuf-java-3.25.5.jar:./onnxruntime_gpu-"${VERSION_NUMBER}".jar --scan-class-path --fail-if-no-tests --disable-banner
 
 
 EXIT_CODE=$?