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@idptools

idptools

A collection of tools developed by the Holehouse Lab for the analysis of protein sequence information, with an emphasis on disordered proteins

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  1. sparrow sparrow Public

    Next generation sequence parameter library for proteins

    Python 31 4

  2. metapredict metapredict Public

    A machine learning based protein disorder predictor.

    Python 24 6

  3. parrot parrot Public

    Python package for protein sequence-based bidirectional recurrent neural network. Generalizable to a variety of protein bioinformatic applications.

    Python 20 2

  4. finches finches Public

    FINCHES (First-principle Interactions via CHEmical Specificity) - Python package for predicting chemically-specific molecular interactions for IDRs

    Jupyter Notebook 20 3

  5. goose goose Public

    A python package for generating disordered sequences and disorder sequence variants.

    Python 11 2

  6. starling starling Public

    STARLING - conSTruction of intrinsicAlly disoRdered proteins ensembles efficientLy vIa multi-dimeNsional Generative models

    Python 11 1

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